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Sample GSM2465573 Query DataSets for GSM2465573
Status Public on Feb 27, 2022
Title wt-SNS-Ganglion-78-weeks-5
Sample type RNA
 
Source name peripheral nervous system
Organism Mus musculus
Characteristics tissue: sympathetic ganglia
strain: C57BL
genotype: wild-type
gender: male
age: 78 weeks
Treatment protocol Fresh-frozen ganglion tissues were isolated by laser capture microdissection and taken up in Trizol
Growth protocol Mice from the Jackson Laboratory, USA.
Maintained under normal mouse chow (ND)
Extracted molecule total RNA
Extraction protocol Qiagen RNEasy Lipid Tissue Mini kit, standard protocol
Label Biotin
Label protocol ENZO T7 High Yield Transcript Labelling Kit, 24h IVT
Biotin/SAPE with Anti Streptavidin signal amplification
 
Hybridization protocol Staining with Fluidic Station 400 Protocol: EukGe-WS2v4
Scan protocol Affymetrix Scanner 3000, single scan
Data processing GCOS 1.4, scaled to 500
 
Submission date Jan 23, 2017
Last update date Feb 28, 2022
Contact name Andreas Johann Richard Habenicht
E-mail(s) [email protected]
Organization name Ludwig Maximilians Universität München
Department Medicine
Lab Institute for Cardiovascular Disease Prevention
Street address Pettenkoferstraße 9a
City Munich
State/province Bavaria
ZIP/Postal code 80336
Country Germany
 
Platform ID GPL8321
Series (2)
GSE93954 Crosstalk between the diseased atherosclerotic aorta and the peripheral nervous system [Ganglion]
GSE94046 Crosstalk between the diseased atherosclerotic aorta and the peripheral nervous system

Data table header descriptions
ID_REF
VALUE scaled signal intensity
ABS_CALL
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 621.4 P 0.00011
AFFX-BioB-M_at 1030.3 P 0.00006
AFFX-BioB-3_at 643.3 P 0.000052
AFFX-BioC-5_at 1876 P 0.00007
AFFX-BioC-3_at 2211.2 P 0.000044
AFFX-BioDn-5_at 4288.7 P 0.000044
AFFX-BioDn-3_at 8944.9 P 0.00007
AFFX-CreX-5_at 22029.7 P 0.000052
AFFX-CreX-3_at 20639.3 P 0.000044
AFFX-DapX-5_at 3157 P 0.000044
AFFX-DapX-M_at 5316.4 P 0.00007
AFFX-DapX-3_at 6169.1 P 0.000044
AFFX-LysX-5_at 261.7 P 0.000044
AFFX-LysX-M_at 510.5 P 0.000581
AFFX-LysX-3_at 1015.2 P 0.000052
AFFX-PheX-5_at 460.3 P 0.00007
AFFX-PheX-M_at 505.9 P 0.000127
AFFX-PheX-3_at 682.4 P 0.000052
AFFX-ThrX-5_at 588.8 P 0.000225
AFFX-ThrX-M_at 889.2 P 0.000044

Total number of rows: 22690

Table truncated, full table size 620 Kbytes.




Supplementary file Size Download File type/resource
GSM2465573_wt-SNS-Ganglion-78-weeks-5.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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