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Sample GSM213919 Query DataSets for GSM213919
Status Public on Jun 23, 2008
Title Xenograft_infected with MxiE mutant strain_rep1
Sample type RNA
 
Source name infected intestinal xenograft tissue
Organism Homo sapiens
Characteristics Scid mice engrafted with human intestinal tissue infected with MxiE mutant strain
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy mini kit
Label biotin
Label protocol Following Affymetrix protocole, using 5 microgrammes of total RNA
 
Hybridization protocol Following Affymetrix protocole: PE-streptavidin
Scan protocol Scanner GCS 3000 with GCOS software
Description Quality were checked with Agilent Bioanalyseur
Data processing RMA normalization
 
Submission date Jul 31, 2007
Last update date Aug 14, 2011
Contact name Thierry Pedron
E-mail(s) [email protected]
Phone 33 1 40 61 36 11
Fax 33 1 45 68 89 53
Organization name Pasteur Institute
Department Biologie cellulaire et Infection
Lab Pathogénie Microbienne Moléculaire
Street address 28 rue du Docteur Roux
City Paris
ZIP/Postal code 75015
Country France
 
Platform ID GPL96
Series (1)
GSE8636 Intestinal xenotransplants infected with Shigella

Data table header descriptions
ID_REF
VALUE intensity

Data table
ID_REF VALUE
1007_s_at 7.969254
1053_at 4.972622
117_at 5.170461
121_at 7.469096
1255_g_at 3.322775
1294_at 7.221757
1316_at 4.123379
1320_at 4.109817
1405_i_at 5.353618
1431_at 3.040386
1438_at 6.111335
1487_at 6.874222
1494_f_at 5.608207
1598_g_at 8.179442
160020_at 7.293291
1729_at 6.126668
1773_at 4.789593
177_at 5.96419
179_at 7.988978
1861_at 5.493224

Total number of rows: 22283

Table truncated, full table size 431 Kbytes.




Supplementary file Size Download File type/resource
GSM213919.CEL.gz 3.1 Mb (ftp)(http) CEL
GSM213919.CHP.gz 5.5 Mb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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