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Sample GSM213099 Query DataSets for GSM213099
Status Public on Jul 26, 2007
Title umbilical cord_nobpd: 6A
Sample type RNA
 
Source name umbilical cord tissue; high gestational age
Organism Homo sapiens
Characteristics 27 weeks female
Extracted molecule total RNA
Extraction protocol initial step used Trizol extraction of RNA, following manufacturer's recommended protocols, followed by Qiagen RNeasy Mini Kit per manufacturer's recommended protocols
Label biotin
Label protocol GeneChip® One-Cycle Target Labeling and Control Reagents according to the manufacturer's recommended protocols
 
Hybridization protocol Affymetrix Hybridization Oven 640 and GeneChip® Fluidics Station 450 according to the manufacturer's recommended protocols
Scan protocol Affymetrix GeneChip® Scanner 3000 according to the manufacturer's recommended protocols
Description high gestational age
Data processing MAS_5.0 scaled to 1500
 
Submission date Jul 25, 2007
Last update date Aug 28, 2018
Contact name Jennifer N Cohen
E-mail(s) [email protected]
Phone 6177328263
Organization name Brigham and Women's Hospital
Department Newborn Medicine
Street address 75 Francis Street
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL570
Series (1)
GSE8586 Expression profiles of extremely low gestational age newborns as predictors of BPD
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS_5.0 value
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 22574.4 P
AFFX-BioB-M_at 33505.9 P
AFFX-BioB-3_at 16546.9 P
AFFX-BioC-5_at 55171.8 P
AFFX-BioC-3_at 75835.3 P
AFFX-BioDn-5_at 117949.6 P
AFFX-BioDn-3_at 310490.7 P
AFFX-CreX-5_at 678914.1 P
AFFX-CreX-3_at 730855.3 P
AFFX-DapX-5_at 543.6 A
AFFX-DapX-M_at 214.6 A
AFFX-DapX-3_at 39.3 A
AFFX-LysX-5_at 455.7 A
AFFX-LysX-M_at 83 A
AFFX-LysX-3_at 384.9 A
AFFX-PheX-5_at 72.5 A
AFFX-PheX-M_at 47.3 A
AFFX-PheX-3_at 138.4 A
AFFX-ThrX-5_at 482.4 A
AFFX-ThrX-M_at 114 A

Total number of rows: 54675

Table truncated, full table size 1011 Kbytes.




Supplementary file Size Download File type/resource
GSM213099.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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