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Sample GSM21298 Query DataSets for GSM21298
Status Public on May 05, 2004
Title Knockout Mouse 2 vs Wild type Mouse 1
Sample type RNA
 
Channel 1
Source name Knockout Mouse 2 Kidney Inner Medula aRNA
Organism Mus musculus
Extracted molecule total RNA
 
Channel 2
Source name Wild type Mouse 1 Kidney Inner Medula aRNA
Organism Mus musculus
Extracted molecule total RNA
 
 
Description Knockout Mouse 2 Kidney Inner Medula (Channel 1) aRNA vs Wild Type Mouse 1 Kidney Inner Medula (Channel 2) aRNA
 
Submission date Apr 08, 2004
Last update date May 27, 2005
Contact name Heddwen Brooks
E-mail(s) [email protected]
Phone 520-626-7702
Organization name University of Arizona
Department Physiology
Lab Brooks Lab
Street address 1501 N Campbell Ave
City Tucson
State/province AZ
ZIP/Postal code 85724-5051
Country USA
 
Platform ID GPL1104
Series (1)
GSE1298 Aquaporin-1 Knockout vs Wild type Mice

Data table header descriptions
ID_REF
CH1_MEAN
CH1_SD
CH1_BKG_MEAN
CH1_BKG_SD
CH1_Median
CH1_BKG_Median
CH2_MEAN
CH2_SD
CH2_BKG_MEAN
CH2_BKG_SD
CH2_Median
CH2_BKG_Median
VALUE Ratio of CH1/CH2 (after linlog [base 2] transformation and location/intensity lowess normalization of local background subtracted data)

Data table
ID_REF CH1_MEAN CH1_SD CH1_BKG_MEAN CH1_BKG_SD CH1_Median CH1_BKG_Median CH2_MEAN CH2_SD CH2_BKG_MEAN CH2_BKG_SD CH2_Median CH2_BKG_Median VALUE
H3001A01 2.59E+03 124.063557 2.52E+03 97.782455 2577 2524.5 963.209717 167.79025 928.54156 157.75545 956.5 937.5 6.86E-02
H3001A02 2.12E+03 194.853146 2.07E+03 259.643059 2078 1996 911.5 184.42815 864.62003 214.80834 921 826.5 7.47E-02
H3001A03 1.34E+03 103.616383 1.30E+03 101.898816 1333 1308.5 597.144837 172.1423 573.22565 172.63644 610 573 6.04E-02
H3001A04 1.95E+03 340.240299 1.91E+03 121.948174 1920.5 1899.5 846.039611 171.77011 837.4545 163.22854 842 830.5 3.56E-01
H3001A05 2.10E+03 154.25856 2.10E+03 276.668961 2080 2024.5 959.954285 178.38618 959.69254 176.60146 954.5 963 6.04E-01
H3001A06 2.34E+03 123.073932 2.37E+03 115.226017 2322.5 2373 1097.408509 182.36713 1071.84436 159.61575 1085.5 1082.5 -2.42E-01
H3001A07 4.61E+03 267.268914 2.40E+03 303.161515 4657 2380 1625.137695 336.0494 900.44885 183.50578 1586.5 891 3.74E-01
H3001A08 2.19E+03 144.551964 2.19E+03 152.590081 2170 2181.5 855.720306 182.48586 849.33847 175.53654 836.5 862 1.46E-01
H3001A09 1.34E+03 95.965374 1.31E+03 84.41679 1341.5 1310 599.347565 156.45114 617.68515 162.84811 599.5 611.5 4.10E-01
H3001A10 2.14E+03 213.921478 1.88E+03 125.115723 2147 1878 916.121949 171.2817 837.31146 177.46598 921 811.5 9.11E-01
H3001A11 2.06E+03 145.686936 1.95E+03 136.008904 2068.5 1944 1026.123932 164.84576 968.53848 157.13047 1028.5 944.5 1.27E-01
H3001A12 1.65E+04 4753.778076 2.30E+03 118.339672 17358 2286.5 6343.276123 2264.73987 1150.74524 171.00398 6561 1161.5 3.68E-01
H3001B01 8.00E+03 1436.649475 1.94E+03 99.630085 8141.5 1943.5 3327.288574 1266.76831 743.24896 164.10626 3365 732.5 -5.14E-02
H3001B02 1.77E+03 254.736237 1.65E+03 94.474308 1750 1661.5 825.630829 172.17757 745.25436 183.22434 823.5 724 -1.04E-01
H3001B03 1.70E+03 182.691834 1.66E+03 97.156304 1679.5 1648.5 665.623077 186.93382 671.15384 179.32582 645.5 694 6.72E-01
H3001B04 3.70E+03 491.978103 1.66E+03 297.849388 3656.5 1604 1937.744629 353.95995 837.28171 311.50833 1928 816.5 1.76E-01
H3001B05 2.13E+03 136.08788 1.88E+03 232.245606 2117.5 1814 1845.263488 176.23724 1020.8407 159.32874 1838.5 1015 -1.27E+00
H3001B06 2.85E+03 138.681511 2.88E+03 153.013534 2838 2883.5 1272.525025 190.48254 1276.76154 156.08292 1258.5 1260.5 -2.38E-01
H3001B07 1.91E+03 131.796463 1.89E+03 101.261872 1904.5 1891 729.59671 219.32368 723.40433 157.32361 720.5 719 -3.94E-03
H3001B08 1.87E+03 887.028779 1.60E+03 98.359532 1774.5 1594 865.816314 169.81963 828.14886 158.68621 870.5 849 1.49E+00

Total number of rows: 15600

Table truncated, full table size 1820 Kbytes.




Supplementary data files not provided
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