NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM206354 Query DataSets for GSM206354
Status Public on Mar 06, 2008
Title NTG mouse_vehicle1
Sample type RNA
 
Source name NTG mouse heart left ventricle
Organism Mus musculus
Characteristics Nontransgenic littermate mouse
Strain: C57 BL/6
Gender: male
Age: ~30wk
Tissue: heart LV
Treatment: vehicle
Extracted molecule total RNA
Extraction protocol Tel-Test Inc RNAzol
Label biotin
Label protocol See Affymetrix Gene Expression Protocol
 
Hybridization protocol See Affymetrix Gene Expression Protocol
Scan protocol See Affymetrix Gene Expression Protocol
Description See Affymetrix Gene Expression Protocol
Data processing See Affymetrix Gene Expression Protocol
 
Submission date Jun 28, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 4610.61 P 0.000581214
AFFX-BioB-M_at 6113.74 P 5.16732e-05
AFFX-BioB-3_at 3629.44 P 4.42873e-05
AFFX-BioC-5_at 13685.1 P 0.00010954
AFFX-BioC-3_at 14235.1 P 4.42873e-05
AFFX-BioDn-5_at 31535.9 P 4.42873e-05
AFFX-BioDn-3_at 61160.9 P 5.16732e-05
AFFX-CreX-5_at 187455 P 5.16732e-05
AFFX-CreX-3_at 183716 P 4.42873e-05
AFFX-DapX-5_at 39.2421 A 0.672921
AFFX-DapX-M_at 27.2889 A 0.699394
AFFX-DapX-3_at 92.2153 A 0.617411
AFFX-LysX-5_at 250.605 A 0.0894591
AFFX-LysX-M_at 51.0547 A 0.921998
AFFX-LysX-3_at 348.817 P 0.026111
AFFX-PheX-5_at 25.7753 A 0.824672
AFFX-PheX-M_at 25.2133 A 0.987453
AFFX-PheX-3_at 197.147 A 0.455413
AFFX-ThrX-5_at 64.764 A 0.876448
AFFX-ThrX-M_at 47.8579 A 0.712257

Total number of rows: 45101

Table truncated, full table size 1369 Kbytes.




Supplementary file Size Download File type/resource
GSM206354.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM206354.CHP.gz 242.0 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap