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Sample GSM206350 Query DataSets for GSM206350
Status Public on Mar 06, 2008
Title ATF6-MER TG mouse_vehicle3
Sample type RNA
 
Source name TG mouse heart left ventricle
Organism Mus musculus
Characteristics Transgenic ATF6-MER mouse
Strain: C57 BL/6
Gender: male
Age: ~30wk
Tissue: heart LV
Treatment: tamoxifen
Extracted molecule total RNA
Extraction protocol Tel-Test Inc RNAzol
Label biotin
Label protocol See Affymetrix Gene Expression Protocol
 
Hybridization protocol See Affymetrix Gene Expression Protocol
Scan protocol See Affymetrix Gene Expression Protocol
Description See Affymetrix Gene Expression Protocol
Data processing See Affymetrix Gene Expression Protocol
 
Submission date Jun 28, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 7609.3 P 0.000509415
AFFX-BioB-M_at 10448.8 P 4.42873e-05
AFFX-BioB-3_at 5165.53 P 4.42873e-05
AFFX-BioC-5_at 22460.6 P 7.00668e-05
AFFX-BioC-3_at 24588.2 P 4.42873e-05
AFFX-BioDn-5_at 44949.9 P 4.42873e-05
AFFX-BioDn-3_at 106926 P 4.42873e-05
AFFX-CreX-5_at 300357 P 5.16732e-05
AFFX-CreX-3_at 303825 P 4.42873e-05
AFFX-DapX-5_at 308.447 A 0.327065
AFFX-DapX-M_at 501.065 A 0.275146
AFFX-DapX-3_at 507.394 A 0.354453
AFFX-LysX-5_at 12.3536 A 0.949786
AFFX-LysX-M_at 102.874 A 0.794268
AFFX-LysX-3_at 393.482 A 0.108979
AFFX-PheX-5_at 41.2009 A 0.868639
AFFX-PheX-M_at 18.547 A 0.991564
AFFX-PheX-3_at 165.632 A 0.574038
AFFX-ThrX-5_at 77.0286 A 0.843268
AFFX-ThrX-M_at 44.028 A 0.891021

Total number of rows: 45101

Table truncated, full table size 1362 Kbytes.




Supplementary file Size Download File type/resource
GSM206350.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM206350.CHP.gz 241.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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