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Sample GSM206349 Query DataSets for GSM206349
Status Public on Mar 06, 2008
Title ATF6-MER TG mouse_vehicle2
Sample type RNA
 
Source name TG mouse heart left ventricle
Organism Mus musculus
Characteristics TG ATF6-MER mouse
Strain: C57 BL/6
Gender: male
Age: ~30wk
Tissue: heart LV
Treatment: vehicle
Extracted molecule total RNA
Extraction protocol Tel-Test Inc RNAzol
Label biotin
Label protocol See Affymetrix Gene Expression Protocol
 
Hybridization protocol See Affymetrix Gene Expression Protocol
Scan protocol See Affymetrix Gene Expression Protocol
Description See Affymetrix Gene Expression Protocol
Data processing See Affymetrix Gene Expression Protocol
 
Submission date Jun 28, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 4741.29 P 0.000662269
AFFX-BioB-M_at 6625.45 P 0.00010954
AFFX-BioB-3_at 3707.6 P 8.14279e-05
AFFX-BioC-5_at 12641 P 8.14279e-05
AFFX-BioC-3_at 11886.8 P 4.42873e-05
AFFX-BioDn-5_at 24157.2 P 4.42873e-05
AFFX-BioDn-3_at 63135.9 P 6.02111e-05
AFFX-CreX-5_at 163528 P 5.16732e-05
AFFX-CreX-3_at 178870 P 4.42873e-05
AFFX-DapX-5_at 136.98 A 0.52976
AFFX-DapX-M_at 326.79 A 0.354453
AFFX-DapX-3_at 237.753 A 0.574038
AFFX-LysX-5_at 100.795 A 0.287743
AFFX-LysX-M_at 85.3812 A 0.891021
AFFX-LysX-3_at 288.654 A 0.116113
AFFX-PheX-5_at 20.6013 A 0.978107
AFFX-PheX-M_at 56.7431 A 0.891021
AFFX-PheX-3_at 169.273 A 0.5
AFFX-ThrX-5_at 70.5225 A 0.672921
AFFX-ThrX-M_at 72.5314 A 0.760937

Total number of rows: 45101

Table truncated, full table size 1365 Kbytes.




Supplementary file Size Download File type/resource
GSM206349.CEL.gz 3.7 Mb (ftp)(http) CEL
GSM206349.CHP.gz 240.4 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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