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GEO accession:
Sample GSM188569
Query DataSets for GSM188569
Status
Public on Dec 25, 2007
Title
Knockout sham, biological rep3
Sample type
RNA
Source name
Heart
Organism
Mus musculus
Characteristics
Genotype: KO
Treatment protocol
Aortic banded vs sham
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Affmetrix standard protocol
Hybridization protocol
Affymetrix strandard protocol
Scan protocol
GeneChip Operating Software (GCOS) 1.4 was used for scanning
Description
Gene Expression data from KO Sham
Data processing
Data was analysed using GeneSpring 7.0, Agilent
Submission date
May 11, 2007
Last update date
Aug 28, 2018
Contact name
Sara Arab
Organization name
Toronto General Hospital
Department
Cardiology
Lab
M. Husain
Street address
610 University Avenue
City
Toronto
State/province
ONT
ZIP/Postal code
M5G 2M9
Country
Canada
Platform ID
GPL1261
Series (1)
GSE7781
Impaired heart function in Apelin gene-deficient mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
352.537
P
0.000445901
AFFX-BioB-M_at
578.633
P
4.42873e-05
AFFX-BioB-3_at
247.443
P
4.42873e-05
AFFX-BioC-5_at
777.323
P
7.00668e-05
AFFX-BioC-3_at
690.661
P
4.42873e-05
AFFX-BioDn-5_at
944.645
P
4.42873e-05
AFFX-BioDn-3_at
3529.22
P
7.00668e-05
AFFX-CreX-5_at
8129.81
P
5.16732e-05
AFFX-CreX-3_at
8043.76
P
4.42873e-05
AFFX-DapX-5_at
5.09094
A
0.41138
AFFX-DapX-M_at
7.70776
A
0.425962
AFFX-DapX-3_at
2.25356
A
0.631562
AFFX-LysX-5_at
0.831403
A
0.60308
AFFX-LysX-M_at
2.12669
A
0.686277
AFFX-LysX-3_at
2.75504
A
0.262827
AFFX-PheX-5_at
3.1082
A
0.794308
AFFX-PheX-M_at
0.497616
A
0.904333
AFFX-PheX-3_at
10.408
A
0.52976
AFFX-ThrX-5_at
7.62872
A
0.41138
AFFX-ThrX-M_at
1.76011
A
0.749204
Total number of rows:
45101
Table truncated, full table size
1378 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM188569.CEL.gz
3.9 Mb
(ftp)
(http)
CEL
GSM188569.CHP.gz
243.9 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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