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GEO accession:
Sample GSM188562
Query DataSets for GSM188562
Status
Public on Dec 25, 2007
Title
Wild type sham, biological rep2
Sample type
RNA
Source name
Heart
Organism
Mus musculus
Characteristics
Genotype: Wild type
Treatment protocol
Aortic banded vs sham
Extracted molecule
total RNA
Extraction protocol
Trizol
Label
Biotin
Label protocol
Affmetrix standard protocol
Hybridization protocol
Affymetrix strandard protocol
Scan protocol
GeneChip Operating Software (GCOS) 1.4 was used for scanning
Description
Gene Expression data from WT Sham
Data processing
Data was analysed using GeneSpring 7.0, Agilent
Submission date
May 11, 2007
Last update date
Aug 28, 2018
Contact name
Sara Arab
Organization name
Toronto General Hospital
Department
Cardiology
Lab
M. Husain
Street address
610 University Avenue
City
Toronto
State/province
ONT
ZIP/Postal code
M5G 2M9
Country
Canada
Platform ID
GPL1261
Series (1)
GSE7781
Impaired heart function in Apelin gene-deficient mice
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
Signal
ABS_CALL
indicating whether the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
357.021
P
0.000389797
AFFX-BioB-M_at
531.979
P
4.42873e-05
AFFX-BioB-3_at
241.576
P
4.42873e-05
AFFX-BioC-5_at
712.965
P
7.00668e-05
AFFX-BioC-3_at
638.612
P
4.42873e-05
AFFX-BioDn-5_at
945.469
P
4.42873e-05
AFFX-BioDn-3_at
3113.84
P
9.4506e-05
AFFX-CreX-5_at
7577.71
P
5.16732e-05
AFFX-CreX-3_at
6603.14
P
4.42873e-05
AFFX-DapX-5_at
7.60686
A
0.156732
AFFX-DapX-M_at
9.80085
A
0.5
AFFX-DapX-3_at
10.1424
A
0.470241
AFFX-LysX-5_at
2.40891
A
0.5
AFFX-LysX-M_at
2.64349
A
0.686277
AFFX-LysX-3_at
9.46528
A
0.108959
AFFX-PheX-5_at
0.650856
A
0.966323
AFFX-PheX-M_at
0.490691
A
0.945802
AFFX-PheX-3_at
15.402
A
0.313723
AFFX-ThrX-5_at
3.51748
A
0.834139
AFFX-ThrX-M_at
6.42891
A
0.470241
Total number of rows:
45101
Table truncated, full table size
1374 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM188562.CEL.gz
4.0 Mb
(ftp)
(http)
CEL
GSM188562.CHP.gz
243.0 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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