|
| Status |
Public on Nov 22, 2018 |
| Title |
DIU300pm.li.t17.rep2 (Diurnal and Circadian) |
| Sample type |
RNA |
| |
|
| Source name |
Grape berry 16 weeks post flowering, collected at 3.00pm, rep 2, diurnal
|
| Organism |
Vitis vinifera |
| Characteristics |
Cabernet Sauvignon
|
| Treatment protocol |
light depravation v natural light
|
| Growth protocol |
Berries were collected from bunches on field grown plants
|
| Extracted molecule |
total RNA |
| Extraction protocol |
The modified RNAeasy RNA extraction method (Qiagen)
|
| Label |
biotin
|
| Label protocol |
Affymetrix One Cycle cDNA synthesis kit, Affymetrix GeneChip Sample Cleanup kit, Affymetrix IVT labeling kit
|
| |
|
| Hybridization protocol |
Affymetrix Fluidics Station 450, Biotin/Streptavidin detection
|
| Scan protocol |
The GeneChips were scanned using theGeneChip Scanner 3000
|
| Description |
Deseeded grape berry 16 weeks post flowering
|
| Data processing |
Data normalized using the GCRMA R package from Bioconductor
|
| |
|
| Submission date |
May 07, 2007 |
| Last update date |
Nov 22, 2018 |
| Contact name |
Mark Raymond Thomas |
| E-mail(s) |
[email protected]
|
| Organization name |
CSIRO
|
| Department |
Plant Industry
|
| Street address |
PO Box 350
|
| City |
Glen Osmond |
| State/province |
SA |
| ZIP/Postal code |
5064 |
| Country |
Australia |
| |
|
| Platform ID |
GPL1320 |
| Series (1) |
| GSE7750 |
Analysis of gene expression changes involved in diurnal and circadian rhythms in grape berries. (DIU_05_circadian). |
|
