GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM180458
Query DataSets for GSM180458
Status
Public on Apr 10, 2007
Title
Hep2_43_rep3
Sample type
RNA
Source name
Hep2 cells heated to 43 degrees rep 3
Organism
Homo sapiens
Characteristics
Cell Culture tissure: Hep2 Cells
Biomaterial provider
Jason M Laramie
Extracted molecule
total RNA
Extraction protocol
Standard Affymetrix Protocol
Label
biotin
Label protocol
standard affymetrix labeling protocol
Hybridization protocol
affymetrix protocol
Scan protocol
affymetrix protocol
Description
na
Data processing
MAS5.0
Submission date
Apr 04, 2007
Last update date
Mar 16, 2009
Contact name
Jason Matthew Laramie
E-mail(s)
[email protected]
URL
http://www.jason-laramie.com
Organization name
Boston University
Department
Bioinformatics
Street address
715 Albany Street
City
Boston
State/province
MA
ZIP/Postal code
02118
Country
USA
Platform ID
GPL8300
Series (1)
GSE7458
Transcriptional Profiles of Human Epithelial Cells in Response to Heat
Data table header descriptions
ID_REF
VALUE
relative expression
ABS_CALL
present or absent call
DETECTION P-VALUE
p-value associated with present/absent call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-MurIL2_at
40.1437
A
0.749204
AFFX-MurIL10_at
30.1975
A
0.712257
AFFX-MurIL4_at
11.1523
A
0.81489
AFFX-MurFAS_at
18.3844
A
0.843268
AFFX-BioB-5_at
69.6744
A
0.631562
AFFX-BioB-M_at
11.4618
A
0.971543
AFFX-BioB-3_at
28.4327
A
0.631562
AFFX-BioC-5_at
101.477
A
0.275146
AFFX-BioC-3_at
7.35137
A
0.995516
AFFX-BioDn-5_at
5.5556
A
0.999028
AFFX-BioDn-3_at
329.832
A
0.559354
AFFX-CreX-5_at
3.26753
A
0.993813
AFFX-CreX-3_at
33.2257
A
0.559354
AFFX-BioB-5_st
131.146
A
0.275146
AFFX-BioB-M_st
41.9552
A
0.60308
AFFX-BioB-3_st
38.8883
A
0.963431
AFFX-BioC-5_st
23.1954
A
0.9273
AFFX-BioC-3_st
21.6409
A
0.645547
AFFX-BioDn-5_st
24.6197
A
0.60308
AFFX-BioDn-3_st
36.4303
A
0.574038
Total number of rows:
12625
Table truncated, full table size
355 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM180458.CEL.gz
2.7 Mb
(ftp)
(http)
CEL
GSM180458.CHP.gz
4.7 Mb
(ftp)
(http)
CHP
Processed data provided as supplementary file
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
