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GEO accession:
Sample GSM173098
Query DataSets for GSM173098
Status
Public on Apr 01, 2008
Title
3 BJ-TE, 100% confluent, ns shRNA
Sample type
RNA
Source name
cell line (BJ-TE)
Organism
Homo sapiens
Characteristics
cell line
Extracted molecule
total RNA
Extraction protocol
trizol
Label
biotin
Label protocol
Affymetrix standard protocol
Hybridization protocol
Affymetrix standard protocol
Scan protocol
Affymetrix standard protocol
Description
BJ-TE cell line in 100 confluent state treated with shRNA control vector
Data processing
Affymetrix standard protocol
Submission date
Mar 06, 2007
Last update date
May 30, 2007
Contact name
Christof Burek
E-mail(s)
[email protected]
Phone
++49 (0)931 20147696
Organization name
Universitaet Wuerzburg
Department
Pathologie
Lab
Rosenwald
Street address
Josef-schneider-Str. 2
City
Wuerzburg
ZIP/Postal code
97080
Country
Germany
Platform ID
GPL571
Series (1)
GSE7201
p73 inhibits malignant transformation
Data table header descriptions
ID_REF
VALUE
absolute fluorescence signal (Affymetrix arbitrary units)
ABS_CALL
present (p), Absent (a)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
243.061
P
0.000581214
AFFX-BioB-M_at
373.307
P
5.16732e-05
AFFX-BioB-3_at
243.664
P
0.00010954
AFFX-BioC-5_at
826.551
P
6.02111e-05
AFFX-BioC-3_at
1110.59
P
4.42873e-05
AFFX-BioDn-5_at
1888.29
P
4.42873e-05
AFFX-BioDn-3_at
3724.29
P
6.02111e-05
AFFX-CreX-5_at
10109.6
P
4.42873e-05
AFFX-CreX-3_at
11744.7
P
4.42873e-05
AFFX-DapX-5_at
506.955
P
5.16732e-05
AFFX-DapX-M_at
875.747
P
0.000258358
AFFX-DapX-3_at
1267.2
P
4.42873e-05
AFFX-LysX-5_at
46.2964
P
0.00227496
AFFX-LysX-M_at
84.8828
P
0.0103167
AFFX-LysX-3_at
188.08
P
5.16732e-05
AFFX-PheX-5_at
96.4029
P
0.000126798
AFFX-PheX-M_at
155.578
P
0.000445901
AFFX-PheX-3_at
147.758
P
0.0020226
AFFX-ThrX-5_at
157.231
P
0.000224668
AFFX-ThrX-M_at
200.673
P
5.16014e-05
Total number of rows:
22277
Table truncated, full table size
679 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM173098.CEL.gz
2.1 Mb
(ftp)
(http)
CEL
GSM173098.CHP.gz
120.4 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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