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GEO accession:
Sample GSM173097
Query DataSets for GSM173097
Status
Public on Apr 01, 2008
Title
2 BJ-TE, 40% confluent, p73 shRNA
Sample type
RNA
Source name
cell line (BJ-TE)
Organism
Homo sapiens
Characteristics
BJ-TE cell line
Extracted molecule
total RNA
Extraction protocol
trizol
Label
biotin
Label protocol
Affymetrix standard protocol
Hybridization protocol
Affymetrix standard protocol
Scan protocol
Affymetrix standard protocol
Description
cell line (BJ-TE) in 40% confluent state treated with shRNA p73
Data processing
Affymetrix standard protocol
Submission date
Mar 06, 2007
Last update date
May 30, 2007
Contact name
Christof Burek
E-mail(s)
[email protected]
Phone
++49 (0)931 20147696
Organization name
Universitaet Wuerzburg
Department
Pathologie
Lab
Rosenwald
Street address
Josef-schneider-Str. 2
City
Wuerzburg
ZIP/Postal code
97080
Country
Germany
Platform ID
GPL571
Series (1)
GSE7201
p73 inhibits malignant transformation
Data table header descriptions
ID_REF
VALUE
absolute signal (Affymetrix arbitrary units)
ABS_CALL
present (p), absent (a)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
219.684
P
0.000509415
AFFX-BioB-M_at
332.766
P
5.16732e-05
AFFX-BioB-3_at
252.995
P
0.000224668
AFFX-BioC-5_at
823.659
P
5.16732e-05
AFFX-BioC-3_at
1228.8
P
4.42873e-05
AFFX-BioDn-5_at
1786.53
P
4.42873e-05
AFFX-BioDn-3_at
3616.83
P
6.02111e-05
AFFX-CreX-5_at
9182.9
P
4.42873e-05
AFFX-CreX-3_at
12914.9
P
5.16732e-05
AFFX-DapX-5_at
461.937
P
6.02111e-05
AFFX-DapX-M_at
859.983
P
0.000581214
AFFX-DapX-3_at
1161.16
P
4.42873e-05
AFFX-LysX-5_at
91.8092
P
0.0020226
AFFX-LysX-M_at
83.3159
P
0.0182806
AFFX-LysX-3_at
166.783
P
9.4506e-05
AFFX-PheX-5_at
123.497
P
0.000195116
AFFX-PheX-M_at
100.338
P
0.000509415
AFFX-PheX-3_at
159.082
P
0.000169227
AFFX-ThrX-5_at
129.793
P
0.000856509
AFFX-ThrX-M_at
208.539
P
4.42873e-05
Total number of rows:
22277
Table truncated, full table size
676 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM173097.CEL.gz
1.9 Mb
(ftp)
(http)
CEL
GSM173097.CHP.gz
122.1 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
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