GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM173096
Query DataSets for GSM173096
Status
Public on Apr 01, 2008
Title
1 BJ-TE, 40% confluent, ns shRNA
Sample type
RNA
Source name
cell line (BJ-TE)
Organism
Homo sapiens
Characteristics
cell line (BJ-TE)
Extracted molecule
total RNA
Extraction protocol
trizol
Label
biotin
Label protocol
Affymetrix standard protocol
Hybridization protocol
Affymetrix standard protocol
Scan protocol
Affymetrix standard protocol
Description
cell line (BJ-TE) 40% confluent treated with control shRNA
Data processing
Affymetrix standard protocol
Submission date
Mar 06, 2007
Last update date
May 30, 2007
Contact name
Christof Burek
E-mail(s)
[email protected]
Phone
++49 (0)931 20147696
Organization name
Universitaet Wuerzburg
Department
Pathologie
Lab
Rosenwald
Street address
Josef-schneider-Str. 2
City
Wuerzburg
ZIP/Postal code
97080
Country
Germany
Platform ID
GPL571
Series (1)
GSE7201
p73 inhibits malignant transformation
Data table header descriptions
ID_REF
VALUE
Abolute Flouroescene Value (affymetrix arbitrary units)
ABS_CALL
Present(p), absent (a)
DETECTION P-VALUE
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
307.454
P
0.000509415
AFFX-BioB-M_at
404.241
P
4.42873e-05
AFFX-BioB-3_at
295.28
P
0.000126798
AFFX-BioC-5_at
920.225
P
6.02111e-05
AFFX-BioC-3_at
1050.18
P
4.42873e-05
AFFX-BioDn-5_at
2031.95
P
4.42873e-05
AFFX-BioDn-3_at
4179.85
P
6.02111e-05
AFFX-CreX-5_at
9998.21
P
5.16732e-05
AFFX-CreX-3_at
12449.1
P
4.42873e-05
AFFX-DapX-5_at
653.517
P
4.42873e-05
AFFX-DapX-M_at
1054.31
P
0.000509415
AFFX-DapX-3_at
1648.95
P
4.42873e-05
AFFX-LysX-5_at
86.3979
P
0.000753643
AFFX-LysX-M_at
101.115
P
0.0151826
AFFX-LysX-3_at
236.583
P
6.02111e-05
AFFX-PheX-5_at
121.992
P
7.00668e-05
AFFX-PheX-M_at
142.048
P
0.0020226
AFFX-PheX-3_at
150.534
P
0.000169227
AFFX-ThrX-5_at
162.885
P
0.00255552
AFFX-ThrX-M_at
218.352
P
4.42873e-05
Total number of rows:
22277
Table truncated, full table size
676 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM173096.CEL.gz
2.0 Mb
(ftp)
(http)
CEL
GSM173096.CHP.gz
121.7 Kb
(ftp)
(http)
CHP
Processed data provided as supplementary file
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
