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Sample GSM1643247 Query DataSets for GSM1643247
Status Public on Feb 20, 2024
Title PHx-WT rep2
Sample type RNA
 
Source name murine liver
Organism Mus musculus
Characteristics strain: C57BL/6
genotype: WT
op: PHx
Extracted molecule total RNA
Extraction protocol Total RNA from all cell samples was isolated using TRIzol Reagent (Invitrogen).
Label biotin
Label protocol Biotinylated cRNA were prepared with the TargetAmpTM Nano-gTM Biotin-aRNA Labeling Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in Partek Genomic Suite
 
Submission date Mar 25, 2015
Last update date Feb 20, 2024
Contact name Joachim Schultze
E-mail(s) [email protected]
Organization name LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
Department Genomics and Immunoregulation
Street address Carl-Troll-Strasse 31
City Bonn
State/province NRW
ZIP/Postal code 53115
Country Germany
 
Platform ID GPL6887
Series (2)
GSE67263 Cooperative role of Lymphotoxin Beta Receptor and Tumor Necrosis Factor Receptor p55 in murine liver regeneration (PHx WT vs KO)
GSE74540 Cooperative role of Lymphotoxin Beta Receptor and Tumor Necrosis Factor Receptor p55 in murine liver regeneration

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 90.26782869 0.323718
ILMN_1212603 82.97759856 0.8942308
ILMN_1212605 145.1609909 0
ILMN_1212607 92.98202882 0.1570513
ILMN_1212612 104.9908652 0.003205128
ILMN_1212614 88.30480271 0.4807692
ILMN_1212619 86.66935122 0.6356838
ILMN_1212623 90.95556469 0.2702991
ILMN_1212625 272.3314896 0
ILMN_1212626 117.5597186 0.001068376
ILMN_1212628 92.23420709 0.1891026
ILMN_1212632 108.7868224 0.002136752
ILMN_1212633 92.82361635 0.1602564
ILMN_1212636 785.0006291 0
ILMN_1212637 1180.269006 0
ILMN_1212638 3987.862634 0
ILMN_1212639 95.17758873 0.09188034
ILMN_1212644 87.61706604 0.5384616
ILMN_1212645 1424.855597 0
ILMN_1212646 282.7454504 0

Total number of rows: 45281

Table truncated, full table size 1471 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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