NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1643245 Query DataSets for GSM1643245
Status Public on Feb 20, 2024
Title PHx-WT rep1
Sample type RNA
 
Source name murine liver
Organism Mus musculus
Characteristics strain: C57BL/6
genotype: WT
op: PHx
Extracted molecule total RNA
Extraction protocol Total RNA from all cell samples was isolated using TRIzol Reagent (Invitrogen).
Label biotin
Label protocol Biotinylated cRNA were prepared with the TargetAmpTM Nano-gTM Biotin-aRNA Labeling Kit
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in Partek Genomic Suite
 
Submission date Mar 25, 2015
Last update date Feb 20, 2024
Contact name Joachim Schultze
E-mail(s) [email protected]
Organization name LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
Department Genomics and Immunoregulation
Street address Carl-Troll-Strasse 31
City Bonn
State/province NRW
ZIP/Postal code 53115
Country Germany
 
Platform ID GPL6887
Series (2)
GSE67263 Cooperative role of Lymphotoxin Beta Receptor and Tumor Necrosis Factor Receptor p55 in murine liver regeneration (PHx WT vs KO)
GSE74540 Cooperative role of Lymphotoxin Beta Receptor and Tumor Necrosis Factor Receptor p55 in murine liver regeneration

Data table header descriptions
ID_REF
VALUE quantile normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1212602 85.78181879 0.6997863
ILMN_1212603 84.07237943 0.8151709
ILMN_1212605 136.2157769 0
ILMN_1212607 95.94328954 0.07051282
ILMN_1212612 89.88634116 0.3183761
ILMN_1212614 82.70828797 0.9070513
ILMN_1212619 86.2331096 0.6495727
ILMN_1212623 90.60256568 0.2735043
ILMN_1212625 261.8505818 0
ILMN_1212626 120.5209383 0
ILMN_1212628 88.51622378 0.426282
ILMN_1212632 109.652888 0
ILMN_1212633 88.27175645 0.4529915
ILMN_1212636 702.6536864 0
ILMN_1212637 1046.749127 0
ILMN_1212638 3603.042615 0
ILMN_1212639 94.87065483 0.09294872
ILMN_1212644 85.22589856 0.7446581
ILMN_1212645 1463.594313 0
ILMN_1212646 267.5639614 0

Total number of rows: 45281

Table truncated, full table size 1452 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap