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Sample GSM1638732 Query DataSets for GSM1638732
Status Public on Jun 01, 2015
Title Cpa3+/+ LFD, 3
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: LFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: Cpa3+/+
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 5
SAMPLE 16
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 131.1131155 4.79906E-09
ILMN_1251402 92.89670154 0.721819504
ILMN_3122480 89.35931446 0.950527122
ILMN_1230863 87.37149443 0.996070303
ILMN_2599935 248.3835161 1.24541E-15
ILMN_1249762 112.0189595 1.81784E-06
ILMN_2653194 109.0628977 0.000345497
ILMN_1227991 88.81957416 0.994092618
ILMN_2445236 93.18032264 0.606015389
ILMN_2675543 89.177981 0.991375104
ILMN_2635314 93.33046594 0.630608999
ILMN_1212991 228.8149483 4.01E-20
ILMN_2686883 99.24971513 0.103140708
ILMN_1223534 99.2431929 0.087316094
ILMN_2514305 92.52382393 0.765670758
ILMN_2751818 94.92730021 0.413865988
ILMN_1217583 114.0531791 7.76961E-07
ILMN_1222597 95.23561633 0.382840911
ILMN_1242561 89.90316798 0.901489065
ILMN_2728634 115.7847773 1.14789E-05

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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