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Sample GSM1638731 Query DataSets for GSM1638731
Status Public on Jun 01, 2015
Title Cpa3Cre/+ LFD, 3
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: LFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: Cpa3Cre/+
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 4
SAMPLE 15
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 152.2562168 5.42728E-09
ILMN_1251402 97.49005263 0.42337292
ILMN_3122480 86.85899515 0.999989303
ILMN_1230863 91.01637352 0.989077891
ILMN_2599935 327.9255258 2.26526E-22
ILMN_1249762 116.7241159 6.38409E-06
ILMN_2653194 103.1857767 0.013434298
ILMN_1227991 89.74349291 0.997309763
ILMN_2445236 103.2169372 0.053273418
ILMN_2675543 101.3669731 0.136543048
ILMN_2635314 96.09900378 0.583141482
ILMN_1212991 228.4555198 5.05982E-17
ILMN_2686883 110.5405278 0.005849528
ILMN_1223534 101.4647553 0.068943781
ILMN_2514305 92.95430087 0.874582844
ILMN_2751818 95.28306449 0.688133031
ILMN_1217583 121.9844281 6.48973E-08
ILMN_1222597 94.0781785 0.812677798
ILMN_1242561 94.15821456 0.795762873
ILMN_2728634 125.7643181 0.000142102

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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