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Sample GSM1638728 Query DataSets for GSM1638728
Status Public on Jun 01, 2015
Title KitW/Wv LFD, 2
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: LFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: KitW/Wv
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 6
SAMPLE 12
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 151.2657268 1.27259E-08
ILMN_1251402 92.43866232 0.970498205
ILMN_3122480 94.27377254 0.802925269
ILMN_1230863 88.59956316 0.99981731
ILMN_2599935 335.0586662 3.35952E-18
ILMN_1249762 123.3536016 9.11901E-05
ILMN_2653194 107.1941696 0.006040737
ILMN_1227991 96.09334058 0.578046452
ILMN_2445236 99.40839854 0.264603844
ILMN_2675543 99.39736165 0.198356692
ILMN_2635314 91.51799986 0.957804314
ILMN_1212991 294.3614205 1.01422E-20
ILMN_2686883 106.9353684 0.015252326
ILMN_1223534 98.81172874 0.322260059
ILMN_2514305 92.9175694 0.834056314
ILMN_2751818 86.50200575 0.998286236
ILMN_1217583 119.4099395 1.10271E-05
ILMN_1222597 94.01891229 0.77457541
ILMN_1242561 89.40222632 0.99744301
ILMN_2728634 104.327227 0.083077513

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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