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Sample GSM1638722 Query DataSets for GSM1638722
Status Public on Jun 01, 2015
Title KitW/Wv HFD, 2
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: HFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: KitW/Wv
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 3
SAMPLE 6
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 166.6829604 1.60634E-19
ILMN_1251402 92.47522104 0.911434289
ILMN_3122480 99.11538768 0.193231088
ILMN_1230863 109.7651736 0.001185837
ILMN_2599935 293.5941385 8.83549E-18
ILMN_1249762 118.9202866 3.56108E-07
ILMN_2653194 99.50096511 0.153748951
ILMN_1227991 99.11530187 0.186679567
ILMN_2445236 113.8764785 0.001882003
ILMN_2675543 101.9218528 0.108157704
ILMN_2635314 97.43223724 0.354419738
ILMN_1212991 193.5538453 5.47421E-18
ILMN_2686883 100.0929159 0.098569158
ILMN_1223534 92.40488561 0.903410957
ILMN_2514305 102.4298606 0.053838246
ILMN_2751818 91.44578553 0.96829716
ILMN_1217583 122.7364554 1.00803E-07
ILMN_1222597 93.21747623 0.901803144
ILMN_1242561 98.37217789 0.284302044
ILMN_2728634 105.2569268 0.010096466

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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