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Sample GSM1638720 Query DataSets for GSM1638720
Status Public on Jun 01, 2015
Title Cpa3+/+ HFD, 2
Sample type RNA
 
Source name Mouse epididymal AT
Organism Mus musculus
Characteristics diet: HFD
background: WBB6F1 (WB X C57Bl/6)
genotype/variation: Cpa3+/+
Treatment protocol Mice were fed a HFD (60% kcal from fat) or chow diet (6% fat) for 12 weeks
eAT was isolated after a 5h morning fast
Extracted molecule total RNA
Extraction protocol Total RNA was isolated using Quiagen RNA minikit
Label Biotin
Label protocol Standard Illumina label protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Group 2
SAMPLE 4
Data processing Data was normalized using the Chipster 3.1.1 software (Genome studio) by the quatile method
 
Submission date Mar 20, 2015
Last update date Jun 01, 2015
Contact name Dario Alejandro Gutierrez
E-mail(s) [email protected]
Phone +496221424128
Organization name German Cancer Research center
Department Cellular Immunology
Street address Im Neuenheimer Feld 280
City Heidelberg
State/province BW
ZIP/Postal code 69120
Country Germany
 
Platform ID GPL17543
Series (1)
GSE67091 Hematopoietic Kit Deficiency, but not lack of mast cells, protects mice from onesity and insulin resistancel

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 130.4733432 1.15427E-06
ILMN_1251402 94.24022555 0.806772247
ILMN_3122480 92.45873883 0.863748682
ILMN_1230863 96.78371664 0.460170578
ILMN_2599935 279.1000518 2.61633E-21
ILMN_1249762 125.1109594 8.26985E-07
ILMN_2653194 116.8749949 0.000884059
ILMN_1227991 85.45678743 0.999815387
ILMN_2445236 94.71827961 0.656738012
ILMN_2675543 100.5587331 0.127417945
ILMN_2635314 90.83770334 0.978186707
ILMN_1212991 260.0286593 2.83608E-17
ILMN_2686883 101.6198279 0.036316556
ILMN_1223534 102.2794256 0.071411094
ILMN_2514305 101.2469097 0.082897264
ILMN_2751818 101.7300985 0.12202292
ILMN_1217583 112.7633659 5.21834E-05
ILMN_1222597 91.72875042 0.952875134
ILMN_1242561 92.12115762 0.95329292
ILMN_2728634 112.6525123 0.000344222

Total number of rows: 46237

Table truncated, full table size 1660 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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