GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158342
Query DataSets for GSM158342
Status
Public on Nov 23, 2007
Title
HB157
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.77551249076006
117_3p_at
7.88181865515899
1494_3p_f_at
7.3921260655892
1552275_3p_s_at
7.91601599059396
1552281_3p_at
9.14335528177474
1552296_3p_at
6.57132266767884
1552302_3p_at
5.7809919516041
1552311_3p_a_at
8.52703178198608
1552321_3p_a_at
4.97263734602577
1552340_3p_at
6.61872684142304
1552343_3p_s_at
6.83185899517718
1552354_3p_at
8.28257449889881
1552476_3p_s_at
8.13733714524615
1552480_3p_s_at
4.19065990131784
1552504_3p_a_at
7.61290065258705
1552518_3p_s_at
5.5374253740499
1552528_3p_at
8.18787473984857
1552535_3p_at
7.75620310030384
1552566_3p_at
7.3107528997263
1552575_3p_a_at
8.41579017568288
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158342.CEL.gz
8.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
