GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158313
Query DataSets for GSM158313
Status
Public on Nov 23, 2007
Title
HB126
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.49069781624492
117_3p_at
7.74316085593163
1494_3p_f_at
7.33703328587053
1552275_3p_s_at
7.69524315604435
1552281_3p_at
9.3640456209102
1552296_3p_at
6.15165676557327
1552302_3p_at
5.7997561355102
1552311_3p_a_at
8.0260176762953
1552321_3p_a_at
5.26554006202472
1552340_3p_at
6.42911997788978
1552343_3p_s_at
6.66519266512978
1552354_3p_at
7.6770005737002
1552476_3p_s_at
8.0541910485325
1552480_3p_s_at
3.79989785247695
1552504_3p_a_at
7.34570302748442
1552518_3p_s_at
5.31655591151140
1552528_3p_at
8.14699762584368
1552535_3p_at
7.85725967058002
1552566_3p_at
6.78689720749337
1552575_3p_a_at
8.43746658866887
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158313.CEL.gz
9.0 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
