GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158259
Query DataSets for GSM158259
Status
Public on Nov 23, 2007
Title
HB72bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
pCR - pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.55608299049282
117_3p_at
7.83308952352588
1494_3p_f_at
7.61742769748506
1552275_3p_s_at
8.08935676350897
1552281_3p_at
9.27452270810596
1552296_3p_at
6.75131129664454
1552302_3p_at
5.93077297150103
1552311_3p_a_at
8.39450879475228
1552321_3p_a_at
5.02706622453514
1552340_3p_at
6.51700269753085
1552343_3p_s_at
7.23010145989812
1552354_3p_at
7.6083345296744
1552476_3p_s_at
8.0892491844178
1552480_3p_s_at
3.89371835835238
1552504_3p_a_at
7.87732534344843
1552518_3p_s_at
5.74868399177944
1552528_3p_at
8.45053947720261
1552535_3p_at
7.69855669663116
1552566_3p_at
6.77642316958195
1552575_3p_a_at
8.25793717314035
Total number of rows:
61359
Table truncated, full table size
2190 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158259.CEL.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
