GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM158215
Query DataSets for GSM158215
Status
Public on Nov 23, 2007
Title
HB28bis
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
npCR - no pathological complete response
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
Standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 161 tumours
Data processing
RMA
Submission date
Jan 25, 2007
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
[email protected]
Organization name
ISREC
Street address
155 Boveresses
City
Lausanne
ZIP/Postal code
1066
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE6861
Prediction of breast cancer pathological complete response to anthracycline/taxane chemotherapy.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.0785334014171
117_3p_at
7.73474270246949
1494_3p_f_at
7.4787264338114
1552275_3p_s_at
8.55206012187788
1552281_3p_at
9.30189944372123
1552296_3p_at
5.65737511406518
1552302_3p_at
5.78086810181257
1552311_3p_a_at
8.29458583200169
1552321_3p_a_at
4.60807068848363
1552340_3p_at
6.55964858957477
1552343_3p_s_at
7.59104164609858
1552354_3p_at
7.57300076278236
1552476_3p_s_at
8.20674366410764
1552480_3p_s_at
3.95472216485038
1552504_3p_a_at
7.45641146770171
1552518_3p_s_at
5.70457362038215
1552528_3p_at
8.4704921860089
1552535_3p_at
7.81725972555395
1552566_3p_at
6.5538923135378
1552575_3p_a_at
8.77941927882037
Total number of rows:
61359
Table truncated, full table size
2189 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM158215.CEL.gz
8.5 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
