NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM15758 Query DataSets for GSM15758
Status Public on Jan 27, 2004
Title FormerSmoker 114
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1161.000 0.000322
1053_at 23.900 0.218983
117_at 87.300 0.081337
121_at 349.000 0.009985
1255_g_at 28.000 0.073830
1294_at 155.600 0.003585
1316_at 47.000 0.017001
1320_at 2.200 0.882840
1405_i_at 45.600 0.006575
1431_at 26.500 0.039365
1438_at 14.900 0.581931
1487_at 248.400 0.043968
1494_f_at 144.500 0.011447
1598_g_at 237.600 0.027860
160020_at 230.300 0.019304
1729_at 145.100 0.002228
1773_at 35.400 0.267463
177_at 45.000 0.127645
179_at 479.400 0.039365
1861_at 76.800 0.048995

Total number of rows: 22215

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM15758.CEL.gz 3.3 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap