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Sample GSM15738 Query DataSets for GSM15738
Status Public on Jan 27, 2004
Title NeverSmoker 105
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1108.600 0.000562
1053_at 13.900 0.621816
117_at 87.600 0.048995
121_at 378.600 0.006532
1255_g_at 29.000 0.127645
1294_at 260.800 0.000959
1316_at 43.700 0.060419
1320_at 20.700 0.679170
1405_i_at 271.600 0.002607
1431_at 35.000 0.014937
1438_at 9.800 0.732537
1487_at 199.200 0.048995
1494_f_at 183.000 0.001892
1598_g_at 469.200 0.008689
160020_at 199.300 0.024711
1729_at 281.400 0.001602
1773_at 16.400 0.561639
177_at 44.500 0.204022
179_at 561.000 0.014937
1861_at 90.300 0.081337

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15738.CEL.gz 3.3 Mb (ftp)(http) CEL

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