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Sample GSM1571677 Query DataSets for GSM1571677
Status Public on Jul 27, 2016
Title whole blood-nonSBI-72 (6303248082_F)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 49
gender: F
race: Black or African American
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI-(No viral test)
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 6303248082_F
Illumina HT12 V4 R2
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2209417 -4.3696 0.6935
ILMN_3306019 15.9874 0.0234
ILMN_3294156 -0.2743 0.5104
ILMN_1765401 -1.0311 0.5506
ILMN_1652171 2.8037 0.361
ILMN_1652170 -13.7888 0.9805
ILMN_1792710 -3.7638 0.6636
ILMN_3294158 1.1677 0.439
ILMN_1703558 56.1207 0
ILMN_1812666 3.6279 0.3247
ILMN_1720799 205.1624 0
ILMN_1703557 12.2806 0.0558
ILMN_1800197 173.1499 0
ILMN_1652175 -1.6888 0.587
ILMN_1732309 4.7309 0.2844
ILMN_3245495 -2.9465 0.6338
ILMN_1872037 5.123 0.2662
ILMN_1765409 26.0059 0
ILMN_1693519 7.2587 0.1727
ILMN_1829064 7.7018 0.1571

Total number of rows: 47323

Table truncated, full table size 1238 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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