NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1571630 Query DataSets for GSM1571630
Status Public on Jul 27, 2016
Title whole blood-nonSBI-25 (6747965052_E)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 32
gender: F
race: American Indian or Alaska Native
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI-(ENTERO)
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 6747965052_E
Illumina HT12 V4 R2
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections
Relations
Reanalyzed by GSE162330

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2209417 -6.237 0.8961
ILMN_3306019 16.018 0.0052
ILMN_3294156 -0.1451 0.4896
ILMN_1765401 -2.4803 0.6662
ILMN_1652171 -0.0597 0.4831
ILMN_1652170 -7.5563 0.9312
ILMN_1792710 0.5835 0.439
ILMN_3294158 -3.2577 0.7234
ILMN_1703558 32.0416 0
ILMN_1812666 5.4526 0.1481
ILMN_1720799 137.526 0
ILMN_1703557 1.4726 0.3636
ILMN_1800197 165.7395 0
ILMN_1652175 2.9385 0.2623
ILMN_1732309 4.0865 0.1987
ILMN_3245495 -3.8361 0.7545
ILMN_1872037 -4.6829 0.8078
ILMN_1765409 19.8151 0.0013
ILMN_1693519 -0.3224 0.5039
ILMN_1829064 6.2356 0.1195

Total number of rows: 47323

Table truncated, full table size 1232 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap