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Sample GSM1571607 Query DataSets for GSM1571607
Status Public on Jul 27, 2016
Title whole blood-nonSBI-2 (6747965055_H)
Sample type RNA
 
Source name whole blood,nonSBI
Organism Homo sapiens
Characteristics age (days): 39
gender: F
race: Black or African American
ethnicity: Not Hispanic or Latino
condition: nonSBI
supplemental condition information: SBI-(ENTERO) / RHINO
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 6747965055_H
Illumina HT12 V4 R2
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections
Relations
Reanalyzed by GSE162330

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2209417 -6.3648 0.8636
ILMN_3306019 10.7462 0.0494
ILMN_3294156 4.6319 0.2013
ILMN_1765401 3.6634 0.239
ILMN_1652171 -0.7101 0.5221
ILMN_1652170 -4.2401 0.7714
ILMN_1792710 -0.2175 0.4909
ILMN_3294158 1.6459 0.3675
ILMN_1703558 57.7435 0
ILMN_1812666 8.0558 0.0883
ILMN_1720799 103.9622 0
ILMN_1703557 7.992 0.0935
ILMN_1800197 65.7975 0
ILMN_1652175 1.8005 0.3558
ILMN_1732309 -2.4454 0.6597
ILMN_3245495 7.846 0.0974
ILMN_1872037 3.15 0.2766
ILMN_1765409 30.4385 0
ILMN_1693519 6.4607 0.1299
ILMN_1829064 4.1039 0.2208

Total number of rows: 47323

Table truncated, full table size 1237 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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