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Sample GSM1571385 Query DataSets for GSM1571385
Status Public on Jul 27, 2016
Title whole blood-SBI-2 (5543434060_F)
Sample type RNA
 
Source name whole blood,SBI
Organism Homo sapiens
Characteristics age (days): 9
gender: F
race: White
ethnicity: Not Hispanic or Latino
condition: SBI
supplemental condition information: SBI+blood_SBI
tissue: whole blood
Treatment protocol None
Growth protocol None
Extracted molecule total RNA
Extraction protocol Blood samples for microarray analyses were placed in baby tempus tubes (Applied Biosystems, CA, USA), frozen and batch shipped to a central laboratory for hybridization
Label biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep kit for Illumina arrays.
 
Hybridization protocol Standard Illumina hybridization protocol .
Scan protocol Standard Illumina scanning protocol .
Description Sample name: 5543434060_F
Illumina HT12 V4 R1
Data processing The data were normalized using average normalization in GenomeStudio’s gene expression module.
 
Submission date Dec 23, 2014
Last update date Mar 16, 2023
Contact name Nicole Baldwin
E-mail(s) [email protected]
Organization name Baylor Research Institute
Street address 3434 Live Oak St
City Dallas
ZIP/Postal code 75204
Country USA
 
Platform ID GPL10558
Series (1)
GSE64456 Defining RNA Transcriptional Biosignatures to Distinguish Febrile Infants 60 Days of Age and Younger with Bacterial vs Non-Bacterial Infections
Relations
Reanalyzed by GSE162330

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1343291 15916.2871 0
ILMN_1343295 3229.3445 0
ILMN_1651199 2.1032 0.513
ILMN_1651209 -2.0121 0.5766
ILMN_1651210 13.0533 0.2325
ILMN_1651221 14.0227 0.2117
ILMN_1651228 2155.2385 0
ILMN_1651229 66.9959 0
ILMN_1651230 14.5777 0.2052
ILMN_1651232 13.9969 0.2117
ILMN_1651235 -21.6762 0.874
ILMN_1651236 -17.786 0.7961
ILMN_1651237 34.5121 0.0039
ILMN_1651238 -23.2633 0.8974
ILMN_1651249 -3.936 0.6078
ILMN_1651253 12.4126 0.2494
ILMN_1651254 875.1393 0
ILMN_1651259 53.7459 0
ILMN_1651260 -20.2141 0.8429
ILMN_1651262 1071.6 0

Total number of rows: 47231

Table truncated, full table size 1234 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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