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Sample GSM15713 Query DataSets for GSM15713
Status Public on Jan 27, 2004
Title CurrentSmoker 113
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1460.800 0.000219
1053_at 42.600 0.031336
117_at 29.700 0.218983
121_at 339.000 0.007543
1255_g_at 10.900 0.339558
1294_at 161.600 0.001141
1316_at 34.700 0.017001
1320_at 15.100 0.679170
1405_i_at 91.200 0.000613
1431_at 22.400 0.054470
1438_at 61.500 0.107301
1487_at 228.700 0.031336
1494_f_at 115.600 0.014937
1598_g_at 289.400 0.007543
160020_at 210.500 0.009985
1729_at 254.600 0.000468
1773_at 17.200 0.378184
177_at 33.500 0.107301
179_at 295.900 0.031336
1861_at 81.600 0.007543

Total number of rows: 22215

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM15713.CEL.gz 3.3 Mb (ftp)(http) CEL

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