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Sample GSM1539757 Query DataSets for GSM1539757
Status Public on Aug 05, 2015
Title 7348931014_G
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 84
gender: Male
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LNDCTL003
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.054949178
ILMN_1806310 6.107894498
ILMN_1653355 6.096692029
ILMN_1705025 6.070250524
ILMN_1814316 6.04095306
ILMN_3241953 6.241919936
ILMN_1735045 6.116976597
ILMN_1680754 6.068310583
ILMN_1659452 6.227293175
ILMN_1767388 6.038048731
ILMN_1755321 6.133049465
ILMN_1698554 6.263337791
ILMN_1814092 6.098871909
ILMN_2061446 6.857304268
ILMN_1676336 6.4829028
ILMN_1752884 6.005412027
ILMN_1668851 6.005765362
ILMN_1726986 6.060150725
ILMN_3237396 6.706168835
ILMN_1688755 7.670308614

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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