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Sample GSM1539691 Query DataSets for GSM1539691
Status Public on Aug 05, 2015
Title 7964814028_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: AD
ethnicity: British_English
age: 81
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00063
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.109353563
ILMN_1806310 6.02658615
ILMN_1653355 6.090878054
ILMN_1705025 6.12240273
ILMN_1814316 6.036365257
ILMN_3241953 6.287142006
ILMN_1735045 6.000100084
ILMN_1680754 6.04688208
ILMN_1659452 6.083655814
ILMN_1767388 6.09679009
ILMN_1755321 6.164583598
ILMN_1698554 6.202338992
ILMN_1814092 6.071501468
ILMN_2061446 7.000430348
ILMN_1676336 6.335612273
ILMN_1752884 6.005380523
ILMN_1668851 5.998121665
ILMN_1726986 6.085526504
ILMN_3237396 6.600364066
ILMN_1688755 7.203066367

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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