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Sample GSM1539649 Query DataSets for GSM1539649
Status Public on Aug 05, 2015
Title 7964814041_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Irish
age: 82
gender: Female
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00284
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.208140877
ILMN_1806310 6.130004895
ILMN_1653355 6.029980752
ILMN_1705025 6.007229766
ILMN_1814316 6.024517488
ILMN_3241953 6.202949585
ILMN_1735045 6.01066838
ILMN_1680754 6.085711607
ILMN_1659452 6.209787306
ILMN_1767388 6.143260052
ILMN_1755321 6.099990337
ILMN_1698554 6.085456269
ILMN_1814092 6.049262556
ILMN_2061446 6.881366862
ILMN_1676336 6.215876094
ILMN_1752884 6.095898149
ILMN_1668851 6.01465713
ILMN_1726986 6.011249767
ILMN_3237396 6.559716933
ILMN_1688755 7.872447179

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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