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Sample GSM1539576 Query DataSets for GSM1539576
Status Public on Aug 05, 2015
Title 7964814051_G
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: AD
ethnicity: British_English
age: 84
gender: Male
included in case -control study: no
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00084
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.206608112
ILMN_1806310 6.136040616
ILMN_1653355 6.151927846
ILMN_1705025 6.008092287
ILMN_1814316 6.03140115
ILMN_3241953 6.252618569
ILMN_1735045 6.000739977
ILMN_1680754 6.188935334
ILMN_1659452 6.154709402
ILMN_1767388 6.039163782
ILMN_1755321 6.107861099
ILMN_1698554 6.217725467
ILMN_1814092 6.391396063
ILMN_2061446 7.102830299
ILMN_1676336 6.190848423
ILMN_1752884 6.061095798
ILMN_1668851 5.988433877
ILMN_1726986 6.046680566
ILMN_3237396 6.671421319
ILMN_1688755 7.469847745

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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