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Sample GSM1539513 Query DataSets for GSM1539513
Status Public on Aug 05, 2015
Title 7348931015_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: AD
ethnicity: British_English
age: 61
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00032
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.074402541
ILMN_1806310 6.201471959
ILMN_1653355 6.080384905
ILMN_1705025 6.012356625
ILMN_1814316 6.037761911
ILMN_3241953 6.181749146
ILMN_1735045 6.01226491
ILMN_1680754 6.117160401
ILMN_1659452 6.096048614
ILMN_1767388 6.044247339
ILMN_1755321 6.104098452
ILMN_1698554 6.154089708
ILMN_1814092 6.216180408
ILMN_2061446 6.949827729
ILMN_1676336 6.210882522
ILMN_1752884 6.013368937
ILMN_1668851 6.041411799
ILMN_1726986 6.027786741
ILMN_3237396 6.824437364
ILMN_1688755 7.804135571

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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