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Sample GSM1539509 Query DataSets for GSM1539509
Status Public on Aug 05, 2015
Title 7196843090_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 75
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00288
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.21271814
ILMN_1806310 6.125614551
ILMN_1653355 6.012286826
ILMN_1705025 6.038569103
ILMN_1814316 6.021082027
ILMN_3241953 6.1700569
ILMN_1735045 6.006957262
ILMN_1680754 6.071531189
ILMN_1659452 6.087351997
ILMN_1767388 6.084502288
ILMN_1755321 6.107561858
ILMN_1698554 6.145993016
ILMN_1814092 6.262036261
ILMN_2061446 7.063323921
ILMN_1676336 6.332977203
ILMN_1752884 6.005335353
ILMN_1668851 6.048799734
ILMN_1726986 6.053384959
ILMN_3237396 6.740463781
ILMN_1688755 7.396091665

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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