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Sample GSM1539504 Query DataSets for GSM1539504
Status Public on Aug 05, 2015
Title 7348931018_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 73
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00144
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.043215754
ILMN_1806310 6.037133673
ILMN_1653355 6.097658736
ILMN_1705025 6.036188566
ILMN_1814316 6.124532854
ILMN_3241953 6.498797695
ILMN_1735045 6.026486722
ILMN_1680754 6.063338619
ILMN_1659452 6.064757251
ILMN_1767388 6.002729481
ILMN_1755321 6.11487956
ILMN_1698554 6.194475129
ILMN_1814092 6.128455985
ILMN_2061446 6.820634322
ILMN_1676336 6.202508919
ILMN_1752884 6.002415872
ILMN_1668851 6.017974269
ILMN_1726986 6.077795946
ILMN_3237396 6.680240996
ILMN_1688755 7.758879282

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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