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Sample GSM1539503 Query DataSets for GSM1539503
Status Public on Aug 05, 2015
Title 7348931013_K
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 73
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00045
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.226764416
ILMN_1806310 6.055544537
ILMN_1653355 6.004320119
ILMN_1705025 6.011047478
ILMN_1814316 6.015152667
ILMN_3241953 6.189757487
ILMN_1735045 6.010855211
ILMN_1680754 6.224228922
ILMN_1659452 6.049690929
ILMN_1767388 6.069204563
ILMN_1755321 6.056875985
ILMN_1698554 6.354312323
ILMN_1814092 6.085818033
ILMN_2061446 7.350328849
ILMN_1676336 6.383697517
ILMN_1752884 6.062621866
ILMN_1668851 5.993585405
ILMN_1726986 6.167923524
ILMN_3237396 6.683231751
ILMN_1688755 7.85762657

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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