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Sample GSM1539494 Query DataSets for GSM1539494
Status Public on Aug 05, 2015
Title 7196843062_A
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 71
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LDZCTL024
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.150261114
ILMN_1806310 6.011686754
ILMN_1653355 6.058553735
ILMN_1705025 6.060548657
ILMN_1814316 6.061131819
ILMN_3241953 6.586712767
ILMN_1735045 5.992808407
ILMN_1680754 6.080149887
ILMN_1659452 6.109050476
ILMN_1767388 6.038289963
ILMN_1755321 6.078574811
ILMN_1698554 6.174945375
ILMN_1814092 6.154143125
ILMN_2061446 6.864579608
ILMN_1676336 6.363562313
ILMN_1752884 6.022344661
ILMN_1668851 6.014450584
ILMN_1726986 6.079874345
ILMN_3237396 6.745944991
ILMN_1688755 7.55521692

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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