NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1539484 Query DataSets for GSM1539484
Status Public on Aug 05, 2015
Title 7196843053_B
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 67
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description KPOCTL047
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.255353996
ILMN_1806310 6.019050088
ILMN_1653355 6.058411711
ILMN_1705025 6.038457245
ILMN_1814316 6.039813583
ILMN_3241953 6.347116304
ILMN_1735045 5.993743806
ILMN_1680754 6.063447184
ILMN_1659452 6.068515798
ILMN_1767388 6.042889552
ILMN_1755321 6.084698558
ILMN_1698554 6.237379596
ILMN_1814092 6.19482354
ILMN_2061446 7.173146888
ILMN_1676336 6.202912278
ILMN_1752884 6.031569903
ILMN_1668851 6.045224792
ILMN_1726986 6.026724603
ILMN_3237396 6.726287103
ILMN_1688755 7.482326971

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap