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Sample GSM1539472 Query DataSets for GSM1539472
Status Public on Aug 05, 2015
Title 7196843035_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 73
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00018
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.030718368
ILMN_1806310 6.052951783
ILMN_1653355 6.056114474
ILMN_1705025 6.02520904
ILMN_1814316 6.098225843
ILMN_3241953 6.185224163
ILMN_1735045 6.01176035
ILMN_1680754 6.098153795
ILMN_1659452 6.090800523
ILMN_1767388 6.080089315
ILMN_1755321 6.101645176
ILMN_1698554 6.105977031
ILMN_1814092 6.227371722
ILMN_2061446 6.984324718
ILMN_1676336 6.404518879
ILMN_1752884 6.022471255
ILMN_1668851 6.011038633
ILMN_1726986 6.054039795
ILMN_3237396 6.733268847
ILMN_1688755 7.170068496

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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