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Sample GSM1539471 Query DataSets for GSM1539471
Status Public on Aug 05, 2015
Title 7964814064_C
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 72
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00246
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.171965962
ILMN_1806310 6.032418566
ILMN_1653355 6.057762714
ILMN_1705025 6.049057413
ILMN_1814316 6.059906526
ILMN_3241953 6.105722064
ILMN_1735045 5.997118742
ILMN_1680754 6.024086119
ILMN_1659452 6.025437624
ILMN_1767388 6.04750882
ILMN_1755321 6.045326385
ILMN_1698554 6.207380955
ILMN_1814092 6.019291336
ILMN_2061446 6.730857729
ILMN_1676336 6.326172343
ILMN_1752884 6.040404522
ILMN_1668851 5.999377869
ILMN_1726986 6.008085866
ILMN_3237396 6.623031231
ILMN_1688755 7.180971619

Total number of rows: 32049

Table truncated, full table size 779 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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