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Sample GSM1539469 Query DataSets for GSM1539469
Status Public on Aug 05, 2015
Title 7348931015_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: British_English
age: 72
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description DCR00380
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.121139043
ILMN_1806310 6.03632969
ILMN_1653355 6.046510513
ILMN_1705025 6.031552793
ILMN_1814316 6.036273101
ILMN_3241953 6.156275105
ILMN_1735045 6.028109429
ILMN_1680754 6.160560276
ILMN_1659452 6.248651771
ILMN_1767388 6.134826599
ILMN_1755321 6.056679703
ILMN_1698554 6.131342211
ILMN_1814092 6.260724818
ILMN_2061446 6.839917316
ILMN_1676336 6.196061833
ILMN_1752884 6.097680758
ILMN_1668851 6.019445585
ILMN_1726986 6.166871528
ILMN_3237396 6.570259171
ILMN_1688755 7.57050393

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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