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Sample GSM1539441 Query DataSets for GSM1539441
Status Public on Aug 05, 2015
Title 7196843072_F
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: CTL
ethnicity: Western European
age: 65
gender: Female
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description PRGCTL052
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.07519139
ILMN_1806310 6.004875478
ILMN_1653355 6.100837736
ILMN_1705025 6.021310007
ILMN_1814316 6.1136433
ILMN_3241953 6.224723589
ILMN_1735045 6.019371018
ILMN_1680754 6.126235888
ILMN_1659452 6.191752429
ILMN_1767388 6.132738962
ILMN_1755321 6.110557178
ILMN_1698554 6.167964863
ILMN_1814092 6.165339976
ILMN_2061446 6.936445597
ILMN_1676336 6.212268946
ILMN_1752884 6.016843983
ILMN_1668851 6.024648637
ILMN_1726986 6.027708799
ILMN_3237396 6.566071176
ILMN_1688755 8.13204998

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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