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Sample GSM1539433 Query DataSets for GSM1539433
Status Public on Aug 05, 2015
Title 7348931005_L
Sample type RNA
 
Source name Blood
Organism Homo sapiens
Characteristics status: MCI
ethnicity: Western European
age: 71
gender: Male
included in case -control study: yes
tissue: blood
Extracted molecule total RNA
Extraction protocol RNA was extracted using PAXgene™ Blood RNA Kit (Qiagen), according to the manufacturer’s instructions
Label biotin
Label protocol TotalPrep™ RNA Amplification Kit (Ambion) using manufacturere's protocol
 
Hybridization protocol cDNA was synthesized from 200ng total RNA using TotalPrep™ RNA Amplification Kit (Ambion) which was followed by amplification and biotinylation of cRNA and hybridization.
Scan protocol Illumina Beadarray Scanner
Description LDZMCI012
Data processing Using LUMI package in R
 
Submission date Nov 06, 2014
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) [email protected], [email protected]
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Platform ID GPL10558
Series (2)
GSE63061 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort (batch 2)
GSE63063 Alzheimer, Mild Cognitive impairment and control samples from AddneuroMed Cohort

Data table header descriptions
ID_REF
VALUE The raw intensities were variance-stabilization transformed and then quantile normalized

Data table
ID_REF VALUE
ILMN_2055271 6.103751842
ILMN_1806310 6.109887719
ILMN_1653355 6.032966495
ILMN_1705025 6.057506396
ILMN_1814316 6.059750396
ILMN_3241953 6.115567682
ILMN_1735045 6.032098436
ILMN_1680754 6.216186178
ILMN_1659452 6.095812103
ILMN_1767388 6.19797729
ILMN_1755321 6.121343337
ILMN_1698554 6.123799652
ILMN_1814092 6.096654571
ILMN_2061446 7.179360412
ILMN_1676336 6.28231566
ILMN_1752884 6.019861305
ILMN_1668851 6.011439191
ILMN_1726986 6.021369211
ILMN_3237396 6.637248409
ILMN_1688755 7.786968003

Total number of rows: 32049

Table truncated, full table size 778 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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