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Sample GSM152145 Query DataSets for GSM152145
Status Public on Dec 01, 2007
Title siz1-3 drought 3
Sample type RNA
 
Source name siz1-3 d3
Organism Arabidopsis thaliana
Characteristics Genotype: siz1-3
age: 3 weeks
Condition: drought 2hr
Extracted molecule total RNA
Extraction protocol TriZOL
Label Biotin
Label protocol MessageAmp™ II-Biotin Enhanced
 
Hybridization protocol GeneChip Expression Analysis Technical Manual
Scan protocol GeneChip Expression Analysis Technical Manual
Description GeneChip Expression Analysis Technical Manual
Data processing GeneChip Expression Analysis Technical Manual
 
Submission date Dec 20, 2006
Last update date Aug 28, 2018
Contact name Rafael Catala
E-mail(s) [email protected]
Phone +112123278093
Organization name The Rockefeller University
Department Plan Molecular Biology
Street address 1230 York ave
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL198
Series (1)
GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE Expression Value
ABS_CALL The absolute call type for expression probe array file
DETECTION-P-VALUE The detection p-value calculated by the MAS 5 software

Data table
ID_REF VALUE ABS_CALL DETECTION-P-VALUE
AFFX-BioB-5_at 304.831 P 7.00668e-05
AFFX-BioB-M_at 321.951 P 4.42873e-05
AFFX-BioB-3_at 245.301 P 4.42873e-05
AFFX-BioC-5_at 895.073 P 4.42873e-05
AFFX-BioC-3_at 618.552 P 4.42873e-05
AFFX-BioDn-5_at 1509.98 P 4.42873e-05
AFFX-BioDn-3_at 2257.37 P 4.42873e-05
AFFX-CreX-5_at 7204.02 P 4.42873e-05
AFFX-CreX-3_at 9072.38 P 4.42873e-05
AFFX-DapX-5_at 129.455 P 0.000169227
AFFX-DapX-M_at 569.793 P 5.16732e-05
AFFX-DapX-3_at 2224.42 P 4.42873e-05
AFFX-LysX-5_at 105.875 P 5.16732e-05
AFFX-LysX-M_at 169.31 P 7.00668e-05
AFFX-LysX-3_at 394.08 P 4.42873e-05
AFFX-PheX-5_at 114.543 P 0.00010954
AFFX-PheX-M_at 166.841 P 5.16732e-05
AFFX-PheX-3_at 489.677 P 7.00668e-05
AFFX-ThrX-5_at 67.3143 P 0.00010954
AFFX-ThrX-M_at 164.247 P 4.42873e-05

Total number of rows: 22810

Table truncated, full table size 682 Kbytes.




Supplementary file Size Download File type/resource
GSM152145.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM152145.CHP.gz 5.8 Mb (ftp)(http) CHP
Processed data provided as supplementary file

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