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Sample GSM152136 Query DataSets for GSM152136
Status Public on Dec 01, 2007
Title Col-0 control 2
Sample type RNA
 
Source name Col-0 c2
Organism Arabidopsis thaliana
Characteristics Ecotype: Columbia 0
age: 3 weeks
Condition: control
Extracted molecule total RNA
Extraction protocol TriZOL
Label Biotin
Label protocol MessageAmp™ II-Biotin Enhanced
 
Hybridization protocol GeneChip Expression Analysis Technical Manual
Scan protocol GeneChip Expression Analysis Technical Manual
Description GeneChip Expression Analysis Technical Manual
Data processing GeneChip Expression Analysis Technical Manual
 
Submission date Dec 20, 2006
Last update date Aug 28, 2018
Contact name Rafael Catala
E-mail(s) [email protected]
Phone +112123278093
Organization name The Rockefeller University
Department Plan Molecular Biology
Street address 1230 York ave
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL198
Series (1)
GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE Expression value
ABS_CALL The absolute call type for expression probe array file
DETECTION-P-VALUE The detection p-value calculated by the MAS 5 software

Data table
ID_REF VALUE ABS_CALL DETECTION-P-VALUE
AFFX-BioB-5_at 354.743 P 4.42873e-05
AFFX-BioB-M_at 297.483 P 4.42873e-05
AFFX-BioB-3_at 254.732 P 4.42873e-05
AFFX-BioC-5_at 828.92 P 4.42873e-05
AFFX-BioC-3_at 630.684 P 4.42873e-05
AFFX-BioDn-5_at 1533.8 P 4.42873e-05
AFFX-BioDn-3_at 2621.32 P 4.42873e-05
AFFX-CreX-5_at 7107.11 P 4.42873e-05
AFFX-CreX-3_at 9697.81 P 4.42873e-05
AFFX-DapX-5_at 105.715 P 6.02111e-05
AFFX-DapX-M_at 560.321 P 5.16732e-05
AFFX-DapX-3_at 1994.24 P 4.42873e-05
AFFX-LysX-5_at 74.3643 P 0.000224668
AFFX-LysX-M_at 146.901 P 5.16732e-05
AFFX-LysX-3_at 315.229 P 4.42873e-05
AFFX-PheX-5_at 125.462 P 0.000389797
AFFX-PheX-M_at 149.326 P 7.00668e-05
AFFX-PheX-3_at 481.972 P 5.16732e-05
AFFX-ThrX-5_at 52.4377 P 0.000296708
AFFX-ThrX-M_at 188.217 P 0.000146581

Total number of rows: 22810

Table truncated, full table size 682 Kbytes.




Supplementary file Size Download File type/resource
GSM152136.CHP.gz 5.8 Mb (ftp)(http) CHP
GSM152136.cel.gz 3.3 Mb (ftp)(http) CEL
Processed data provided as supplementary file

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