NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM152134 Query DataSets for GSM152134
Status Public on Dec 01, 2007
Title Col-0 control 1
Sample type RNA
 
Source name Col-0 c1
Organism Arabidopsis thaliana
Characteristics Columbia 0
Age: 21 days
Condition: control
Extracted molecule total RNA
Extraction protocol TriZOL
Label Biotin
Label protocol MessageAmp™ II-Biotin Enhanced
 
Hybridization protocol GeneChip Expression Analysis Technical Manual
Scan protocol GeneChip Expression Analysis Technical Manual
Description GeneChip Expression Analysis Technical Manual
Data processing GeneChip Expression Analysis Technical Manual
 
Submission date Dec 20, 2006
Last update date Aug 28, 2018
Contact name Rafael Catala
E-mail(s) [email protected]
Phone +112123278093
Organization name The Rockefeller University
Department Plan Molecular Biology
Street address 1230 York ave
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL198
Series (1)
GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
Relations
Reanalyzed by GSE119083

Data table header descriptions
ID_REF
VALUE Expression value
ABS_CALL The absolute call type for expression probe array file
DETECTION-P-VALUE The detection p-value calculated by the MAS 5 software

Data table
ID_REF VALUE ABS_CALL DETECTION-P-VALUE
AFFX-BioB-5_at 244.759 P 4.42873e-05
AFFX-BioB-M_at 299.961 P 4.42873e-05
AFFX-BioB-3_at 284.614 P 5.16732e-05
AFFX-BioC-5_at 848.718 P 4.42873e-05
AFFX-BioC-3_at 737.849 P 5.16732e-05
AFFX-BioDn-5_at 1606.65 P 4.42873e-05
AFFX-BioDn-3_at 2363.31 P 4.42873e-05
AFFX-CreX-5_at 6942.73 P 4.42873e-05
AFFX-CreX-3_at 11035.3 P 4.42873e-05
AFFX-DapX-5_at 134.508 P 7.00668e-05
AFFX-DapX-M_at 670.031 P 5.16732e-05
AFFX-DapX-3_at 1992.09 P 4.42873e-05
AFFX-LysX-5_at 92.5441 P 9.4506e-05
AFFX-LysX-M_at 175.906 P 8.14279e-05
AFFX-LysX-3_at 332.719 P 4.42873e-05
AFFX-PheX-5_at 110.455 P 7.00668e-05
AFFX-PheX-M_at 160.774 P 7.00668e-05
AFFX-PheX-3_at 506.915 P 6.02111e-05
AFFX-ThrX-5_at 57.4412 P 0.000753643
AFFX-ThrX-M_at 176.614 P 0.000126798

Total number of rows: 22810

Table truncated, full table size 682 Kbytes.




Supplementary file Size Download File type/resource
GSM152134.CEL.gz 3.3 Mb (ftp)(http) CEL
GSM152134.CHP.gz 5.8 Mb (ftp)(http) CHP
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap